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Extended Software Development Workshop: Quantum Dynamics

18 Jun - 29 Jun

If you are interested in attending this event, please visit the CECAM website here.

Workshop Description

Quantum molecular dynamics simulations describe the behavior of matter at the microscopic scale and require the combined effort of theory and computation to achieve an accurate and detailed understanding of the motion of electrons and nuclei in molecular systems. Theory provides the fundamental laws governing the dynamics of quantum systems, i.e., the time-dependent Schroedinger equation or the Liouville-von Neumann equation, whereas numerical techniques offer practical ways of solving those equations for applications. For decades now, theoretical physicists and quantum chemists have been involved in the development of approximations, algorithms, and computer softwares, that together have enabled for example the investigation of photo-activated processes, like exciton transfer in photovoltaic compounds, or of nonequilibrium phenomena, such as the current-driven Joule heating in molecular electronics. The critical challenge ahead is to beat the exponential growth of the numerical cost with the number of degrees of freedom of the studied problem. In this respect, a synergy between theoreticians and computer scientists is becoming more and more beneficial as high-performance computing (HPC) facilities are nowadays widely accessible, and will lead to an optimal exploitation of the computational power available and to the study of molecular systems of increasing complexity.

From a theoretical perspective, the two main classes of approaches to solving the quantum molecular dynamical problem are wavepacket propagation schemes and trajectory-based (or trajectory-driven) methods. The difference between the two categories lies in the way the nuclear degrees of freedom are treated: either fully quantum mechanically or within the (semi)classical approximation. In the first case, basis-function contraction techniques have to be introduced to represent the nuclear wavefunction as soon as the problem exceeds 5 or 6 dimensions. Probably the most successful efforts in this direction have been oriented towards the development of the multi-configuration time-dependent Hartree (MCTDH) method [1]. Other strategies are also continuously proposed, focusing for instance on the identification of procedures to optimize the “space” where the wavefunction information is computed, e.g., by replacing Cartesian grids with Smolyak grids [2], and thus effectively reducing the computational cost of the calculation. In the second case, the nuclear subsystem is approximated classically, or semiclassically. Although leading to a loss of some information, this approximation offers the opportunity to access much larger systems for longer time-scales. Various examples of trajectory-based approaches can be mentioned, ranging from the simplest, yet very effective, trajectory surface hopping and Ehrenfest schemes [3], to the more involved but also more accurate coupled-trajectory mixed quantum-classical (CTMQC) [4] and quantum-classical Liouville equation (QCLE) [5]. At the interface between wavepacket and trajectory schemes, Gaussian-MCTDH [6], variational multi-configuration Gaussian (vMCG) [7], and multiple spawning [8] exploit the support of trajectories to propagate (Gaussian) wavepackets, thus recovering some of the information lost with a purely classical treatment. In the case of trajectory-based techniques, the literature provides a significant number of propositions that aim at recovering some of the quantum-mechanical features of the dynamics via appropriately choosing the initial conditions based on the sampling of a Wigner distribution [9].

From the computational point of view, a large part of the calculation effort is spent to evaluate electronic properties. In fact, the nuclei move under the effect of the electronic subsystem, either “statically” occupying its ground state or “dynamically” switching between excited states. Also, the nuclear dynamics part of a calculation becomes itself a very costly computational task in the case of wavepacket propagation methods. Therefore, algorithms for molecular dynamics simulations are not only required to reproduce realistically the behavior of quantum systems in general cases, but they also have to scale efficiently on parallelized HPC architectures.

The extended software development workshop (ESDW) planned for 2018 has three main objectives: (i) build upon the results of ESDW7 of July 2017 to enrich the library of softwares for trajectory-based propagation schemes; (ii) extend the capabilities of the existing modules by including new functionalities, thus giving access to a broader class of problems that can be tackled; (iii) construct links among the existing and the new modules to transversally connect methods for quantum molecular dynamics, types of modules (HPC/Interface/Functionality), and E-CAM work-packages (WP2 on electronic structure).

The central projects of the proposed ESDW, which are related to the modules that will be provided for the E-CAM library, are:
1. Extension of the ModLib library of model Hamiltonians, especially including high-dimensional models, which are used to test and compare existing propagation schemes, but also to benchmark new methods. The library consists of a set of subroutines that can be included in different codes to generate diabatic/adiabatic potential energy surfaces, and eventually, diabatic and nonadiabatic couplings, necessary for both quantum wavepackets methods and trajectory-based methods.
2. Use of machine-learning techniques to construct analytical forms of potential energy surfaces based on information collected along on-the-fly calculations. The Quantics software [10] provides the platform for performing direct-dynamics propagation employing electronic-structure properties determined at several different levels of theory (HF, DFT, or CASSCF, for example). The sampled nuclear configuration space is employed to build a “library” of potentials, that will be used for generating the potential energy surfaces.
3. Development of an interface for CTMQC. Based on the CTMQC module proposed during the Extended Software Develoment Workshop (ESDW) 7, the interface will allow the evolution of the coupled trajectories according to the CTMQC equations based on electronic-structure information calculated from quantum-chemistry packages, developing a connection between the E-CAM WP2 on electronic structure and WP3 on quantum dynamics. Potentially, CTMQC can be adapted to the Quantics code, since the latter has already been interfaced with several electronic-structure packages. Optimal scaling on HPC architectures is fundamental for maximizing efficiency.
4. Extension of the QCLE module developed during the ESDW7 to high dimensions and general potentials. Two central issues need to be addressed to reach this goal : (i) the use of HPC infrastructures to efficiently parallelize the multi-trajectory implementation, and (ii) the investigation of the stochastic sampling scheme associated with the electronic part of the time evolution. Progress in these areas will aid greatly in the development of this quantum dynamics simulation tool that could be used by the broader community.
5. Development of a module to sample initial conditions for trajectory-based procedures. Based on the PaPIM module proposed during the ESDW7, sampling of initial conditions from a Wigner distribution will be adapted to excited-state problems, overcoming the usual approximation of a molecule pictured as a set of uncoupled harmonic oscillators. Also, an adequate sampling of the ground vibrational nuclear wavefunction would ensure calculations of accurate photoabsorption cross-sections. This topic connects various modules of the E-CAM WP3 since it can be employed for CTMQC, QCLE, and for the surface-hopping functionality (SHZagreb developed during the ESDW7) of Quantics.
6. Optimization of some of the modules for HPC facilities, adopting hybrid OpenMP-MPI parallelization approaches. The main goal here is to be able to exploit different architectures by adapting different kinds of calculations, e.g., classical evolution of trajectories vs. electronic-structure calculations, to the architecture of the computing nodes.

The format and organization described here focuses specifically on the production of new modules. Parallel or additional activities, e.g. transversal workshop on optimization of I/O with electronic structure code and possible exploitation of advanced hardware infrastructures (e.g. booster cluster in Juelich), will also be considered based on input from the community.

[1] H. D. Meyer, U. Manthe, L. S. Cederbaum. Chem. Phys. Lett. 165 (1990) 73.
[2] D. Lauvergant, A. Nauts. Spectrochimica Acta Part A 119 (2014) 18.
[3] J. C. Tully. Faraday Discuss. 110 (1998) 407.
[4] S. K. Min, F. Agostini, I. Tavernelli, E. K. U. Gross. J. Phys. Chem. Lett. 8 (2017) 3048.
[5] R. Kapral. Annu. Rev. Phys. Chem. 57 (2006) 129.
[6] G. A. Worth, I. Burghardt. Chem. Phys. Lett. 368 (2003) 502.
[7] B. Lasorne, M. J. Bearpark, M. A. Robb, G. A. Worth. Chem. Phys. Lett. 432 (2006) 604.
[8] M. Ben-Nun, J. Quenneville, T. J. Martínez. J. Phys. Chem. A 104 (2000) 5161.
[9] J. Beutier, D. Borgis, R. Vuilleumier, S. Bonella. J. Chem. Phys. 141 (2014) 084102.
[10] Quantics. A suite of programs for molecular quantum dynamics. http://stchem.bham.ac.uk/~quantics/doc/
[11] PaPIM. A code for calculation of equilibrated system properties (observables). http://e-cam.readthedocs.io/en/latest/Quantum-Dynamics-Modules/modules/PaPIM/readme.html



18 Jun
29 Jun
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Maison de la Simulation
Saclay, France


Federica Agostini
Basile Curchod
Ari Paavo Seitsonen